CDS

Accession Number TCMCG017C22220
gbkey CDS
Protein Id OMO79109.1
Location complement(join(38358..38486,39059..39172,39453..39517,39645..39787,39894..40000,40627..40713,40833..40901,42133..42240))
GeneID InterPro:IPR001715
Organism Corchorus olitorius
locus_tag COLO4_24545

Protein

Length 273aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018643.1
Definition hypothetical protein COLO4_24545 [Corchorus olitorius]
Locus_tag COLO4_24545

EGGNOG-MAPPER Annotation

COG_category Z
Description Microtubule-associated protein RP EB family member
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K10436        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000079        [VIEW IN EMBL-EBI]
GO:0000922        [VIEW IN EMBL-EBI]
GO:0001932        [VIEW IN EMBL-EBI]
GO:0001934        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005876        [VIEW IN EMBL-EBI]
GO:0005881        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0008017        [VIEW IN EMBL-EBI]
GO:0008022        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009524        [VIEW IN EMBL-EBI]
GO:0009574        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009612        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009652        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009958        [VIEW IN EMBL-EBI]
GO:0010005        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010562        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019901        [VIEW IN EMBL-EBI]
GO:0030496        [VIEW IN EMBL-EBI]
GO:0030863        [VIEW IN EMBL-EBI]
GO:0030981        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033674        [VIEW IN EMBL-EBI]
GO:0042325        [VIEW IN EMBL-EBI]
GO:0042327        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043549        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044448        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045737        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045859        [VIEW IN EMBL-EBI]
GO:0045860        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045937        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051347        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0055028        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071900        [VIEW IN EMBL-EBI]
GO:0071902        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1904029        [VIEW IN EMBL-EBI]
GO:1904031        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCGAATATAGGAATGATGGATAGTGCTTACTTTGTTGGAAGAAATGAGATTCTAACGTGGATCAACAACAGGCTTCAGCTTAATCTCTCTCGAATTGAAGAAGCTGCTTCAGGTGCTGTACAGTGTCAGATGATAGATATGACCTATCCAGGAGCTGTTCCAATGCACAAGGTGAATTTTGACGCAAAGTCAGAATATGATATGATTCAAAACTACAAGGTTCTGCAAGAAGTATTCAACAAGTTGAAAATTGAAAAGCATATTGAAGTCAATAGACTTGTTAAAGGTAGACCTTTGGACAATCTGGAGTTCTTACAATGGCTGAAACGTTATTGTGATTCTGTGAATGGTGGAATTATGAATGAGAATTATAATCCTGTTGAGCGGAGACTTAAAGGTGGAAAGGAGCGGAACTTGAAGGGTTCCCATAAGAGTTCAAAATCTCTCCAAGCAAACAATCTCCATAACTCTGCCTCTGGAGATACAGCTGCTGTTAATAAAAACTCTGTTTCCAAGCAAGGGAAGATGGGTGTAGCAACGGCTTCAGGGGATGCCCAGGCTTTGTCCAAGGAGATTACTGATCTGAAGCTCTCTGTCGACCTTTTGGAAAAGGAAAGAGATTTTTACTTTGCTAAATTGCGGGATATTGAGATACTTTGTCAGACTCCTGAAGTCGAGAATATCCCGATGGCAGTAGCAATAAAGAAAATACTTTACGCTGCTGATGCAAAAGAAAATGCACTCGAAGAAGCTCAGGAGTATATTAGCCAATCTGTTGATGAAGGTGAAACAGAAGAGGGAGAGGAGGAGAATTGA
Protein:  
MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKVNFDAKSEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRLKGGKERNLKGSHKSSKSLQANNLHNSASGDTAAVNKNSVSKQGKMGVATASGDAQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPEVENIPMAVAIKKILYAADAKENALEEAQEYISQSVDEGETEEGEEEN